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Biowerkzeug Wiki - User contributions [en]
2026-04-21T19:14:18Z
User contributions
MediaWiki 1.45.3
https://biowerkzeug.org/index.php?title=Force_fields&diff=95
Force fields
2008-08-06T15:40:00Z
<p>Martin: New page: = OPLS = To convert between HIPPO and GROMACS units use this excel sheet</p>
<hr />
<div>= OPLS =<br />
<br />
To convert between HIPPO and GROMACS units use this excel sheet</div>
Martin
https://biowerkzeug.org/index.php?title=Monte_Carlo_codes&diff=94
Monte Carlo codes
2008-07-07T18:03:25Z
<p>Martin: </p>
<hr />
<div>A non-exhaustive list of codes available to the academic community to perform [[Monte Carlo simulations]] of biomolecules. For all codes listed, source code is available.<br />
<br />
== Free for academics ==<br />
* [[Hippo]]<br />
<br />
== Nominal fee for academics ==<br />
* [[Charmm]]<br />
* [[BOSS]]<br />
<br />
[[Category:Monte Carlo]]<br />
[[Category:Software]]</div>
Martin
https://biowerkzeug.org/index.php?title=Main_Page&diff=16
Main Page
2008-06-27T23:37:28Z
<p>Martin: added hippo section</p>
<hr />
<div>{| width="100%" cellspacing="0" cellpadding="0"<br />
| colspan="2" |<br />
This Wiki discusses biomolecular simulations with [[Hippo]] and other molecular dynamics/Monte Carlo codes. It serves as a repository for the community and complements the [http://forums.biowerkzeug.org forums]. <br />
<br />
<br />
|-<br />
| width="50%" style="vertical-align:top;" |<br />
== Molecular Mechanics ==<br />
* [[Molecular dynamics]]<br />
* [[Monte Carlo]]<br />
* [[Force fields]]<br />
* [[Algorithms]]<br />
* [[Solvents]]<br />
* [[Membranes]]<br />
<br />
<br />
| width="50%" style="vertical-align:top;" |<br />
== Hippo ==<br />
* [[Simulations]]<br />
* [[Analysis]]<br />
* [[Graphical interface]]<br />
* [[Files and features]]<br />
<br />
|-<br />
| width="50%" style="vertical-align:top;" |<br />
== Getting started ==<br />
<br />
* [http://meta.wikimedia.org/wiki/Help:Contents User's Guide]<br />
* [http://www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]<br />
* [http://www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]<br />
* [http://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]<br />
<br />
|}</div>
Martin